rabbit anti human cd47  (Boster Bio)

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A) Schematic representation of LLC and H1299 lines engineered with deletion of the C-terminal half of CD47, which encodes its transmembrane and cytoplasmic tail domains. The signal peptide (light blue), transmembrane domains (grey), extra/intracellular domains (dark blue), and cytoplasmic tail (purple) are indicated. Confirmation of CD47 KO by qPCR (B-C) , immunoblotting (D-E) , flow cytometry (F-G), and immunofluorescence (H-I) .

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Western Blot, Flow Cytometry, Immunofluorescence

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A) Principal component analysis indicating dissimilarity in transcriptomes of LLC WT and CD47 KO cells. B) Heatmap of the 500 most variably expressed genes in LLC cells. CD47 is one of the most significantly downregulated genes in CD47 KO cells and is represented in this heatmap. C) Statistically significant DEGs common to both CD47 KO lines. D-G) GSEA results indicating gene sets enriched for downregulated DEGs in CD47 KO cells. D-E) MSigDB Hallmark pathways and F-G) Gene Ontology: Biological Processes (GO:BP). H) Top ARCHS4 Transcription Factor gene sets enriched for downregulated DEGs identified using EnrichR. I-K) Genes contributing to the Cell-Cell Adhesion, Cell Migration, and MAPK Signaling processes enriched for DEGs that are downregulated in CD47 KO cells. The colour scale indicates the average log 2 fold change in expression across both CD47 KO clones relative to WT cells.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Migration, Expressing, Clone Assay

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A,B) Immunoblotting for EMT markers, E-cadherin, N-cadherin, and Vimentin in the LLC model. C,D) Quantitation of EMT marker expression across replicate experiments in LLC cells. E,F) EMT marker expression in the H1299 model. G,H) Quantitation of EMT marker expression in H1299 cells. One-sample t-tests were used to compare the fold-change in expression between WT and KO cells. I-L) Dose response curves and IC 50 values indicating the response of LLC and H1299 lines to paclitaxel. Paclitaxel treatments were done using a maximum dose of 500nM and 2-fold serial dilutions. IC 50 values were compared between WT and CD47 KO cells using a two-tailed student’s t-test.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Western Blot, Quantitation Assay, Marker, Expressing, Two Tailed Test

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A-B) Imaging-based proliferation assay monitoring cell confluence over 48 or 92 hours. Percent confluence indicates the fraction of well area covered by cells. Comparisons of confluencies between WT and CD47 KO cells were done using two-tailed student’s t-test with multiple testing correction across all timepoints for LLC and H1299. All t-tests between WT and KO cells were non-significant. C) Schematic representation of the multi-colour competition assays. D-E) Western blots confirming CRISPR-mediated loss of CD47 expression in LLC and H1299 Cas9+ lines. Cas9-expressing cells were transduced with mCherry (mCH) or GFP lentivectors to express control sgRNA targeting LacZ (for mouse) or AAVS1 (AV, for human), or sgRNA targeting CD47 (CD47-1, CD47-2). F-G) Loss of CD47 surface expression confirmed by flow cytometry. H-I) Competition assay results indicating the relative fitness of cells with wildtype (sgLacZ, sgAV) CD47 versus cells with genetically disrupted CD47 (sgCD47). “ns” indicates t-test results for comparing GFP+ ratios between the different cell mixtures at the final passage. Data are representative of three independent experiments for each model.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Imaging, Proliferation Assay, Two Tailed Test, Western Blot, CRISPR, Expressing, Transduction, Control, Flow Cytometry, Competitive Binding Assay

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A-B) Results for cell adhesion assays in the LLC and H1299 models one hour after cell seeding. Cell density was quantified based on SRB staining. C-D) Wound healing assays to measure cell migration after scratching a confluent monolayer. Wound width was quantified at two timepoints after the scratch and normalized to the initial wound width. Asterisks shown indicate statistical significance at assay endpoints. Data presented for cell adhesion assays are representative of 3 independent experiments. Data for migration assays are representative of 3-4 independent experiments. E-F) Western blots confirming CD47 reconstitution in LLC and H1299 cells with CD47 KO. CD47 expression was induced by treating LLC cells with 500 ng/mL and H1299 with 100 ng/mL of doxycycline (Dox) for 24hrs. G-H) Flow cytometry confirmation of surface level CD47 expression after Dox induction in the CD47 KO lines. I-J) Results for adhesion assays in CD47-deficient LLC and H1299 cells with and without Dox-induced re-expression of CD47. K-L) Migration assay results for the same cells in I,J. Adhesion assays results in I,J are representative of 3 independent experiments. Migration assay results in K,L are representative of 3 independent experiments. Comparisons between groups were done using two-tailed t-tests.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Staining, Migration, Western Blot, Expressing, Flow Cytometry, Two Tailed Test

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A-D) Western blots and quantitation for phospho-ERK (pERK) expression in WT versus CD47 KO cells under basal conditions. pERK expression is presented as a fold-change relative to total ERK expression and compared across groups using a one-sample t-test. E-H) Western blots and quantitation of CD47 and pERK in LLC and H1299 CD47 KO cells with and without 24-48h of Dox treatment at 500 ng/ml (LLC) or 100 ng/ml (H1299) to induce CD47 expression.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Western Blot, Quantitation Assay, Expressing

Journal: bioRxiv

Article Title: CD47 regulates pro-metastatic phenotypes through an ERK-dependent epithelial-to-mesenchymal transition program in non-small cell lung cancer

doi: 10.1101/2025.09.25.678579

Figure Lengend Snippet: A-D) Immunoblots and quantitation confirming phospho-ERK (pERK) upregulation in LLC and H1299 WT and CD47 KO cells expressing a Dox-inducible ERK2 construct treated with and without 500 ng/ml (LLC) or 100ng/ml (H1299) Dox for 24-48h. pERK expression is normalized to Vinculin (Vinc) since Dox treatment induces total ERK and fold-changes in pERK expression were compared with one-sample t-tests. E-H) Results for adhesion and migration assays in the same ERK-inducible LLC and H1299 cells pre-treated with or without 500 ng/ml (LLC) or 100ng/ml (H1299) Dox for 24-48h. Asterisks shown indicate statistical significance for two-tailed t-tests. Data presented are representative of 3 (LLC) and 3 (H1299) replicate experiments.

Article Snippet: Western blots were done using the following antibodies on serum-starved cells: mouse CD47 (1:1000, R&D Systems AF1866), human CD47 (1:1000, CST #63000), p44/42 MAPK (Erk1/2) (1:1000, CST #4696S), phospho-p44/42 MAPK (Erk1/2) (1:1000, CST #4370S), Cdc42 (1:1000, CST #2462), pSRC (1:1000, #2101), SRC (1:1000, #2110), Vimentin (1:1000, #5741), N-Cadherin (1:1000, #13116), E-cadherin (1:1000, #3195), GAPDH (1:5000, CST #97166S), Vinculin (CST #13901S).

Techniques: Western Blot, Quantitation Assay, Expressing, Construct, Migration, Two Tailed Test

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a Overview of the outline for establishing H1975 and HEK293T cell lines expressing a fusion GFP gene in the C-terminus of CD47 (CD47-GFP) and subsequently identifying the deubiquitinase of CD47 through DUB siRNA library screening with two stable cell lines. DUBs deubiquitinases; FACS fluorescence-activated cell sorting; MFI mean fluorescence intensity. b Whole-cell lysates (WCL) of H1975 or PC9 cells treated with indicated deubiquitinase inhibitors (2.5 µM) or dimethyl sulfoxide (DMSO) for 12 hours (h) were prepared and subjected to immunoblotting (IB) analysis. c – e IB analysis of WCL derived from H1975 cells ( c ) and PC9 cells ( e ) treated with ML364 (1 µM and 2 µM) or DMSO for 16 h. The mRNA level of CD47 in H1975 cells ( c ) was measured using reverse transcription quantitative PCR (RT-qPCR) ( d ). f , g Immunofluorescence (IF) staining for CD47 in H1975 cells ( f ) and PC9 cells ( g ) treated with ML364 (2 µM) for 16 h. Scale bar, 25 μm. h – k IB analysis of WCL derived from H1975 ( h ) or PC9 ( j ) cells stably expressing sh USP2 or sh GFP , respectively. The mRNA level of CD47 in H1975 ( i ) or PC9 ( k ) cells was measured using RT-qPCR. l , m IB analysis of Cd47 protein expression in the tissues of lung, heart, or kidney obtained from wild-type (WT) and Usp2 −/− mice ( l ). Quantification of Cd47 protein band intensity was normalized to vinculin ( m ). n – p IB analysis of WCL derived from HEK293T cells co-transfected with indicated constructs ( n , p ). The mRNA level of CD47 was quantified by RT-qPCR ( o ). EV: empty vector. q , r IB analysis of WCL derived from HEK293T cells co-transfected with indicated constructs. Cells were treated with 200 μg/ml CHX for the indicated time points ( q ). Quantification of CD47 protein band intensity was normalized to vinculin, then compared to the t = 0 time point ( r ). s , t Representative images from immunohistochemical (IHC) staining of CD47 and USP2 in human lung adenocarcinoma ( s ). Scale bar, left panels: 100 μm; right panels: 50 μm. n = 83. Quantification of USP2 and CD47 staining intensities was performed as average optical density (AOD) [AOD = Integrated Optical Density (IOD) SUM/Area SUM] (t) . For ( d , i , k , m , o , and r ), unpaired two-tailed Student’s t -test. Correlations were analyzed by Pearson’s test ( t ). Data are shown as the mean ± SD, n = 3 independent biological replicates. P < 0.05 was considered statistically significant. n = 3 biologically independent experiments for ( b , c , e , h , j , l , n , p , and q ). Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Expressing, Library Screening, Stable Transfection, Fluorescence, FACS, Western Blot, Derivative Assay, Reverse Transcription, Real-time Polymerase Chain Reaction, Quantitative RT-PCR, Immunofluorescence, Staining, Transfection, Construct, Plasmid Preparation, Immunohistochemical staining, Immunohistochemistry, Two Tailed Test

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a IB analysis of HEK293T WCL and anti-HA immunoprecipitates (IPs). HEK293T cells were co-transfected with indicated constructs and treated with 10 µM MG132 for 12 h before harvesting. b IB analysis of glutathione S-transferase (GST) pull-down protein mixture from HEK293T cell lysates that overexpressed CD47-cHA incubated with bacterially purified recombinant GST or GST-USP2 protein. c IB analysis of GST pull-down products from HEK293T cell lysates that overexpressed Flag-USP2 incubated with bacterially purified recombinant GST or GST-CD47 protein. d Schematic representation of WT and truncations of USP2, including the N-terminal region of amino acid (aa) 1–266 and C-terminal domain of aa267–605. e IB analysis of WCL and anti-HA IPs obtained from HEK293T cells, which were co-transfected with indicated constructs and treated with 10 µM MG132 for 12 h before harvesting. f IB analysis of GST pull-down products derived from HEK293T cell lysates that ectopic expression of CD47-cHA incubated with bacterially purified recombinant GST, GST-USP2 WT, and GST-USP2 truncations. g IB analysis of GST pull-down products derived from HEK293T cell lysates that ectopic expression of Flag-USP2 WT and truncations incubated with bacterially purified recombinant GST-CD47 protein. h Schematic diagram of CD47 WT and its various deletion mutants. i IB analysis of GST pull-down products derived from HEK293T cell lysates that ectopic expression of CD47-cHA WT and deletion mutants incubated with bacterially purified recombinant GST-USP2 protein. j , k IB analysis of WCL and IPs derived from H1975 ( j ) and PC9 ( k ) cells. l , m IB analysis of WCL and Ni-NTA pull-down products of the in vivo ubiquitination assay in the guanidine-HCl denaturing buffer. HEK293T cells were co-transfected with the indicated constructs and treated with 10 µM MG132 for 12 h before harvesting. n IB analysis of WCL and Ni-NTA pull-down products of the in vivo ubiquitination assay in the guanidine-HCl denaturing buffer. HEK293T cells were co-transfected with the indicated constructs and treated with 2 µM ML364 for 16 h and 10 µM MG132 for 12 h before harvesting. o , p IB analysis of WCL and IPs derived from lysates of H1975 ( o ) and PC9 ( p ) cells using indicated K48-Ubi antibodies. Cells were treated with 20 µM MG132 for 6 h before harvesting. q , r IB analysis of WCL and anti-CD47 IPs derived from H1975 ( q ) or PC9 ( r ) cells stably expressing sh USP2 or sh GFP , respectively. Cells were treated with 20 µM MG132 for 6 h before harvesting. n = 3 biologically independent experiments for ( a , b , c , e , f , g , and i – r ). Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Transfection, Construct, Incubation, Purification, Recombinant, Derivative Assay, Expressing, In Vivo, Ubiquitin Proteomics, Stable Transfection

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a A schematic treatment plan for immunocompetent C57BL/6J mice bearing LLC tumors. Mice were subcutaneously implanted with 2 × 10 6 LLC cells and treated with a control vehicle, USP2 inhibitor (ML364, 5 mg/kg, daily for 12 doses), anti-PD-1 mAb (100 μg per mouse, every three days for 4 treatments), or combined treatment, respectively. i.p., intraperitoneal; s.c., subcutaneous; MAb, monoclonal antibody. b , c Tumor growth ( b ) or Kaplan–Meier survival curves ( c ) for C57BL/6J bearing LLC tumors with indicated treatments. d The weight of LLC tumors was measured at the endpoint. e Quantification of cellular surface CD47 on CD45 − cells in subcutaneous LLC tumors derived from C57BL/6J mice with indicated treatments. f – h Quantification of MHCII + (M1 macrophage) cells ( f ) or CD206 + (M2 macrophage) cells ( g ) represented as percentage of F4/80 + macrophages, and CD8 + T cells ( h ) represented as percentage of CD3 + T cells in subcutaneous LLC tumors derived from C57BL/6J mice-indicated treatments. i A schematic treatment plan for the immunocompetent C57BL/6J lung tumor mouse model. Mice were injected with 1 × 10 6 LLC cells/per mouse via tail vein injection, followed by treatments with control vehicle, ML364 (5 mg/kg), anti-PD-1 mAb (100 μg per mouse), or combined treatment, respectively. i.p., intraperitoneal; i.v., intravenous. j – l Representative H&E-stained images of lung tissues from mice across different groups ( j ), tumor size was quantified by measuring the cross-sectional area of all tumors ( k ), and the tumor-occupied lung area (tumor area, %) was calculated ( l ) from three nonconsecutive sections per mouse. Scale bars, 5 mm. m LLC-GFP tumors bearing C57BL/6J mice were treated as ( a ). Representative images of IF staining for tumor cells (GFP, green), macrophages (F4/80, red), and nuclei (DAPI, blue). The yellow (indicated with arrows) showing colocalization of GFP (green) and F4/80 (red) double-positive cells suggested the macrophage phagocytosis of tumor cells. Each point represents the average counts of yellow cells within three high-power fields. The sections were scanned at 60× with an oil objective on a confocal microscope. Scale bars, 50 μm (left panels); zoom scale bars, 20 μm (right panels). For ( d – h , k , and l ), unpaired two-tailed Student’s t -test. Two-way ANOVA for ( b ). Log-rank test for ( c ). n = 5 mice per group. Data are shown as the mean ± SD. P < 0.05 was considered statistically significant. Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Control, Derivative Assay, Injection, Staining, Microscopy, Two Tailed Test

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a Diagrammatic treatment plan for immunocompetent C57BL/6J mice with LLC tumors. Mice were implanted with 2 × 10 6 LLC cells and treated with Vehicle, ML364 (5 mg/kg daily for 18 doses), anti-PD-1 mAb (100 μg/mouse every three days for 6 doses), or combination therapy. i.p., intraperitoneal; s.c., subcutaneous. b Tumor volume in different treatment groups was assessed using calipers, and the tumor growth curve was generated. n = 8 (Vehicle); 8 (ML364); 8 (anti-PD-1 mAb) and 10 (Combined therapy) mice. c Kaplan–Meier survival curves for C57BL/6J bearing LLC tumors with indicated treatments. Log-rank test. n = 8 (Vehicle); 8 (ML364); 8 (anti-PD-1 mAb) and 10 (Combined therapy) mice. d A schematic treatment plan for immunocompetent C57BL/6J mice bearing 2 × 10 6 LLC tumors. Mice were treated with a control vehicle, USP2 inhibitor (ML364, 30 mg/kg for 18 doses), anti-PD-1 mAb (200 μg per mouse for 6 doses), or combined treatment, respectively. e Tumor volume in the different treatment groups was measured using calipers, and the corresponding tumor growth curve was generated. Vehicle (n = 9), ML364 (n = 8), PD-1 mAb (n = 8), ML364 & PD-1 mAb (n = 13) mice per group. f Kaplan–Meier survival curves for C57BL/6J bearing LLC tumors with indicated treatments. Vehicle (n = 9), ML364 (n = 8), PD-1 mAb (n = 8), ML364 & PD-1 mAb (n = 13) mice per group. Log-rank test. g IHC staining for CD47 and PD-L1 in LLC tumors from C57BL/6J mice treated with indicated reagents. Scale bar, 50 μm. h , i Quantification for CD47 ( h ) and PD-L1 ( i ) positive cells. Each point represents the average counts of positive cells within three high-power fields. For ( h ) and ( i ), unpaired two-tailed Student’s t -test. n = 5 mice per group. Log-rank test for ( c , f ). Data are shown as the mean ± SD. P < 0.05 was considered statistically significant. Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Generated, Control, Immunohistochemistry, Two Tailed Test

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a A schematic treatment plan for immunocompetent C57BL/6J mice bearing sg Control- or sg Cd47- LLC tumors. Mice were subcutaneously implanted with 2 × 10 6 sg Control or sg Cd47 -LLC cells and treated with a control vehicle, USP2 inhibitor (ML364, 5 mg/kg, daily for 12 doses), anti-PD-1 mAb (100 μg per mouse, every three days for 4 treatments), or combined treatment, respectively. i.p., intraperitoneal; s.c., subcutaneous. b , c Tumor volume in each treatment group was measured using calipers, and the tumor growth curve was subsequently plotted ( b ). At the study endpoint, the weight of LLC tumors was recorded ( c ). n = 5 mice per group. d The body weight of C57BL/6J mice was monitored throughout the duration of the indicated treatment. n = 5 mice per group. e A schematic treatment plan for CD8 T cell or macrophage deletion experiments. Mice were randomly divided into five groups: (1) vehicle, (2) ML364 & PD-1 mAb (MP), (3) MP & CD8 deletion (αCD8), (4) MP & macrophage deletion (clodronate liposomes, CL), and (5) MP & αCD8 & CL. On day 5 post-tumor implantation, mice in MP were treated with a combination of ML364 (5 mg/kg) daily for 12 treatments and anti-PD-1 mAb (100 μg per mouse) every 3 days for 4 doses. After grouping as indicated, mice received αCD8 antibody (200 μg per mouse) every 3 days for 4 doses, starting three days before tumor implantation. Macrophage deletion by CL was administered with 200 μl per mouse every 3 days for 4 doses, starting on the day of tumor implantation. i.p., intraperitoneal; s.c., subcutaneous. f , g Tumor volume for each treatment group was measured using calipers, and the tumor growth curve was plotted ( f ). The weight of LLC tumors was measured at the endpoint ( g ). n = 5 mice per group. h , i Quantification of CD8 + represented as percentage of CD3 + T cells ( h ) and F4/80 + macrophages represented as percentage of CD11b + cells ( i ) in subcutaneous LLC tumors derived from C57BL/6J mice treated with indicated reagents. For ( c ) and ( g – i ), unpaired two-tailed Student’s t -test. n = 5 mice per group. Two-way ANOVA for ( b , d , and f ). Data are shown as the mean ± SD. P < 0.05 was considered statistically significant. Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Control, Liposomes, Tumor Implantation, Derivative Assay, Two Tailed Test

Journal: Nature Communications

Article Title: USP2 inhibition unleashes CD47-restrained phagocytosis and enhances anti-tumor immunity

doi: 10.1038/s41467-025-59621-5

Figure Lengend Snippet: a , b Representative IF staining images for CD163 (green) and CD8 (red) in human lung adenocarcinoma (LUAD) tissues with the USP2 high (n = 13) and low (n = 16) expression ( a ). Quantifications of CD163 and CD8 positive cells in LUAD samples with USP2 high or low expression, respectively ( b ). Each point represents the average counts of positive cells within three high-power fields. Scale bars, 500 μm (left panels); zoom scale bars, 50 μm (right panels). c – e USP2 expression was negatively correlated with the infiltration of M1 macrophages ( c ) and CD8 + T cells ( e ), while USP2 displayed a positive correlation with the infiltration of M2 macrophages ( d ) in lung cancer patients based on the immune association analysis by TIMER2.0 software. f , g Representative images from IHC staining of CD47 and USP2 in responders (R) and non-responders (NR) of lung cancer patients with anti-PD-1 therapy ( f ). Scale bar, left panels: 100 μm; right panels: 50 μm. Association between USP2 or CD47 expression and response to anti-PD-1 therapy in lung cancer patients ( g ). n = 6 (R), or 6 (NR). Patients were divided into USP2 or CD47 low and high expression groups according to their IHC score mean value ( f ). h , i Representative images of multiplex immunohistochemistry (mIHC) staining for R and NR of lung cancer patients with anti-PD-1 immunotherapy ( h ). Quantifications of CD163 (white), CD8 (red), and CK (green) in each group ( i ). Each point represents the average counts of positive cells within three high-power fields. n = 5 per group. Scale bars, 100 μm (left panels); zoom scale bars, 50 μm (right panels). j , k Representative images from IHC staining of CD47 and USP2 in responders and non-responders of oral cancer patients with anti-PD-1 therapy ( j ). Scale bar, left panels: 100 μm; right panels: 50 μm. Association between USP2 or CD47 expression and response to anti-PD-1 therapy in oral cancer patients ( k ). n = 25 (R), or 19 (NR). Patients were divided into USP2 or CD47 low and high expression groups according to their IHC score mean value ( j ). l , m Representative images of mIHC staining for responders and non-responders of oral cancer patients with anti-PD-1 therapy ( l ). Quantifications of CD163 (white), CD8 (red), and CK (green) in each group ( m ). Each data point represents the average counts of positive cells within three high-power fields. n = 18 (R), or 13 (NR). Scale bars, 100 μm (left panels); zoom scale bars, 50 μm (right panels). For ( b ), unpaired two-tailed Student’s t -test. For ( g ) and ( k ), a two-sided χ 2 test. For ( i ) and ( m ), two-tailed Non-parametric Mann–Whitney test. Data are shown as the mean ± SD P < 0.05 was considered statistically significant. Source data are provided as the Source Data file.

Article Snippet: Anti-human CD47 (D3O7P) Rabbit mAb (63000, 1:200), anti-mouse CD8α Rabbit mAb (98941, 1:200), anti-human CD8 Rabbit pAb (85336, 1:200), and anti-human Pan-Keratin (C11) Mouse mAb (4545, 1:400) were purchased from Cell Signaling Technology.

Techniques: Staining, Expressing, Software, Immunohistochemistry, Multiplex Assay, Two Tailed Test, MANN-WHITNEY

Journal: The Journal of Biological Chemistry

Article Title: The CIS association of CD47 with integrin Mac-1 regulates macrophage responses by stabilizing the extended integrin conformation

doi: 10.1016/j.jbc.2023.103024

Figure Lengend Snippet: Association of CD47 with Mac-1 on the surface of various Mac-1–expressing cells probed by immunoprecipitation analyses.A, purified WT and CD47-deficient inflammatory peritoneal mouse macrophages were lysed and immunoprecipitated with rabbit polyclonal anti-αM antibody, rabbit polyclonal anti-CD47 antibody, or control rabbit IgG that was used as a specificity control. Blots were analyzed with rabbit polyclonal antibodies against the αM or CD47. The lysates of WT and CD47-deficient macrophages were analyzed by Western blotting using anti-αM and CD47 antibodies. B, murine IC-21 macrophages were lysed and immunoprecipitated with anti-αM rabbit polyclonal antibody or rabbit polyclonal anti-CD47 antibody, and blots were analyzed with rabbit polyclonal antibody against the αM or CD47. C, biotinylated Mac-1-HEK293 cells were lysed and immunoprecipitated with mAb 44a against the αM subunit or isotype control IgG1. Blots were disclosed with streptavidin-conjugated horseradish peroxidase (HRP). The molecular weight of the αM (165 kDa) and β2 (95 kDa) integrin subunits and CD47 (47 kDa) are indicated on the right of the panel. D, suspended (denoted “s”) or adherent (denoted “a”) Mac-1-HEK293 cells were lysed and immunoprecipitated with anti-αM mAb 44a or anti-β2 mAb IB4. Blots were analyzed with anti-αM, anti-β2, and anti-CD47 antibodies. E, the ratios of CD47 to the αM and β2 integrin subunits in the immunoprecipitates from suspended and adherent cells were determined from the densitometry analyses of blots. The ratio of CD47 to each integrin subunit in suspended cells was taken as 1.0. F, lysates of biotinylated Mac-1-HEK293 cells were immunoprecipitated with anti-CD47 mAb B6H12; then immunoprecipitates were subjected to Western blotting probed with streptavidin-HRP (left panel; 1 IP). After the first round of immunoprecipitation, the supernatant was immunoprecipitated with anti-αM mAb 44a (middle panel; 2 IP). The third round of immunoprecipitation (3 IP) was performed using anti-β1 mAb (right panel). M, molecular weight markers.

Article Snippet: The rabbit polyclonal anti-human/mouse CD47 antibody (catalog #CD47-101AP) was from FabGennix.

Techniques: Expressing, Immunoprecipitation, Purification, Western Blot, Molecular Weight